Not even gonna bother trying to explain it.
Short version: Radical muslims brought two towers to the ground. It makes sense that people are afraid and intolerant of the word 'muslim' and the people who call themselves 'muslims'. Not saying 'hey this is okay'.
That is the point.

Leading to the second part: what did I gay, homosexual, confused 13 year old boy to deserve as much intolerance as something as HUGE as the first subject. What did anyone whom was gay do to deserve intolerance?

THAT was the point.
Not 'Youth hates muslims'